Apple Xserve G5 manual Networking Throughput, NetBench SMB, HMMer Genome Sequence Matching

Page 9

Technology Overview

9

Xserve G5

HMMer 2.3.3

HMMer is another application that demonstrates the advantages of Xserve G5 with Velocity Engine for processor-intensive scientific analysis. HMMer is a genome sequence–matching application that uses Hidden Markov Models (HMMs) to identify similarities in genetic structures. The core routines of HMMer repeatedly perform the same operation on large amounts of data. To test the performance of the HMMer code, Apple searched for an HMM created from a 358-residue sequence in the protein databank (PDB) and measured the time to search the entire PDB.

HMMer: Genome Sequence Matching

Xserve G5

Dual 2GHz PowerPC G5

Dell PowerEdge 1750

Dual 3.2GHz Xeon

IBM eServer x335

Dual 3.2GHz Xeon

IBM eServer x325

Dual 2GHz Opteron

69% faster

33% faster

27% faster

Baseline

Percent faster than Opteron-based system

The dual 2GHz Xserve G5 performed the HMMer search up to 33 percent faster than the 3.2GHz Xeon-based servers and 69 percent faster than the 2GHz Opteron-based server.

Networking Throughput

To minimize bottlenecks and ensure maximum data throughput, Xserve G5 features a high-performance I/O architecture optimized for server tasks.

NetBench SMB

Xserve G5 provides the best balance of processor, network, and disk performance— critical for delivering file services to large numbers of network clients.

NetBench SMB: Windows File Serving

 

200

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Xserve G5

 

 

 

 

 

 

 

 

with Mac OS X Server

 

160

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

IBM eServer x335

per second

 

 

 

 

 

 

 

with Windows Server 2003

120

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Megabits

80

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

40

 

 

 

 

 

 

 

 

0

 

 

 

 

 

 

 

 

1

4

8

12

16

20

24

28

Simultaneous clients

With more than 12 NetBench clients, Xserve G5 with Mac OS X Server delivers Windows file services significantly faster than the Xeon-based server with Windows Server 2003, and its performance remains high even as clients are added to the network.

Image 9
Contents Technology Overview January Xserve G5Contents What’s New? IntroductionProduct Overview Key FeaturesXserve G5 Xserve RAIDXserve G5 Server Configuration Rack-Optimized Server DesignBack view High-Density Cluster Node Configuration Most innovative HPC hardwareXserve G5 Cluster Processor Performance Performance Overview$333 per gigaflop Technology Overview Linpack Double-Precision CalculationsBlast DNA Sequence Matching HMMer Networking ThroughputNetBench SMB HMMer Genome Sequence MatchingWebBench Apache Web Serving WebBenchBit Computing Power PowerPC G5 ProcessorApple and IBM Partnership Billion times biggerPowerPC G5 Architecture Next-Generation PowerPC ArchitectureVast amounts of addressable memory Multiple high-precision calculationsHigh-Bandwidth Server Architecture Server-Optimized ArchitectureTotal throughput of up to 1GB/s Point-to-Point System Controller Gigahertz Frontside BusAdvanced ECC Memory Technology Double Data Rate DDR memoryDual Onboard Gigabit Ethernet High-Performance PCI-X ExpansionSupport for up to 8GB of RAM ECC protectionAdditional Connectivity Sata Drive Technology Affordable, Scalable StorageInternal storage comparison Up to 750GB of storageMonitoring of drive health Hot-plug Apple Drive ModulesXserve Storage Scalability Apple Drive ModuleSoftware and Hardware RAID Options Xserve RAID storage solutionSoftware RAID in Mac OS X Server Optional hardware RAID PCI cardRemote monitoring Integrated Hardware MonitoringAutomatic notifications Xserve Remote DiagnosticsBuilt-In Network Services Optimized for the PowerPC G5Mac OS X Server Version New in Mac OS X Server versionInnovative Remote Management High-availability servicesAppleCare Premium Service and Support Plan AppleCare Service Parts KitConvenient replacement modules Mac OS X Server Maintenance Program Mac OS X Server Software SupportTraining and Certification Programs Standard Configurations Purchasing InformationBuild-to-Order Options Compute power with Macintosh ease of use Related ProductsApple Workgroup Cluster for Bioinformatics Hardware Technical SpecificationsProcessor MemoryStorage Size and weightRack support Electrical requirementsFor More Information Included servicesSoftware Mac OS X Server

Xserve G5 specifications

The Apple Xserve G5 was a powerful rack-mounted server that was introduced by Apple in 2004. Built on the robust PowerPC architecture, it marked a significant entry into the enterprise server market for the company, reflecting its commitment to high-performance computing and advanced technology solutions.

One of the main features of the Xserve G5 was its dual dual-core PowerPC G5 processors, which allowed for exceptional computation performance. This configuration enabled up to 8 processing cores in a single server unit, significantly enhancing multitasking capabilities and making it suitable for high-demand applications. With support for up to 16GB of DDR SDRAM, the server ensured ample memory for intensive operations and large-scale data processing tasks.

In terms of storage, the Xserve G5 featured a versatile design that supported up to four hot-swappable Serial ATA (SATA) drive bays. This capability enabled users to easily replace or upgrade hard drives without downtime, which is crucial in enterprise environments. The server also supported RAID configurations, offering options for increased reliability and data redundancy.

Networking capabilities were another highlight of the Xserve G5. It came equipped with dual Gigabit Ethernet ports, providing robust network throughput and redundancy. This feature was particularly valuable for mission-critical applications where uptime and performance were essential. Additionally, the Xserve G5 was compatible with various networking protocols and featured built-in support for Active Directory, simplifying integration into existing IT infrastructures.

The operating system of choice for the Xserve G5 was Mac OS X Server, which offered a user-friendly interface along with powerful server management tools. The software provided a wide range of services, including file sharing, web hosting, and email services, tailored for small to medium enterprises and education institutions.

For those seeking expandability, the Xserve G5 boasted a PCI-X expansion slot, allowing users to add various hardware components such as additional network interfaces or specialized processing cards.

In terms of its physical design, the Xserve G5 had a sleek, 1U form factor, making it easy to integrate into existing server racks while maintaining a modern aesthetic. The efficient cooling system was designed to keep the unit running optimally, ensuring reliability during extended periods of use.

In conclusion, the Apple Xserve G5 represented a significant advance in server technology with its powerful dual G5 processors, ample memory and storage options, and robust networking capabilities. Its combination of performance and user-friendly Mac OS X Server made it a notable choice for organizations seeking reliable computing solutions in the mid-2000s.