Compaq mar345 manual Calibration Files

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mar345 Program Manual

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B. Calibration Files

Each scanner comes with 2 scanner specific calibration files. These files must reside in directory $MARTABLEDIR and are called mar2300.XXX and mar3450.XXX, where XXX is the three−digit serial number. The file contain flat field and geometrical corrections require d for producing Cartesian images out of a spiral scan.

File mar2300.XXX is used for scans at pixelsizes of 0.15mm (modes 2300, 2000, 1600 an d 1200) and has a typical size of 73 MB.

File mar3450.XXX is used for scans at pixelsizes of 0.10mm (modes 3450, 3000, 2400 an d 1800) and has a typical size of 103 MB.

Both files are binary files. They feature an Ascii−file header that can be looked up usin g program catmar.

A typical output of command "catmar mar2300.120 " looks like this:

Format type: mar 345 ...

==============================================================

Line At byte Contents

==============================================================

4

(

192)

PROGRAM

improve Version 2.8

 

 

 

5

(

256)

DATE

Wed Feb

2 12:00:40 2000

 

6

(

320)

SCANNER

120

 

 

 

 

 

 

 

7

(

384)

PIXEL

LENGTH 75

 

HEIGHT 150

SUBPIXELS 25

8

(

448)

PHIOFF

269.970

 

 

 

 

 

 

9

(

512)

CUTOFF

0.000

 

 

 

 

 

 

 

10

(

576)

SCALE

32767.000

 

 

 

 

 

 

11

(

640)

GAIN

1.000

 

 

 

 

 

 

 

12

(

704)

NUMBER

PIXELS 7766361

NEIGHBOURS 25199739

13

(

768)

MODE

2300

X

0

Y 1149

ROFF

0

SKIP 144

14

(

832)

MODE

2000

X

0

Y

999

ROFF

0

SKIP 144

15

(

896)

MODE

1600

X

0

Y

800

ROFF

0

SKIP 809

16

(

960)

MODE

1200

X

0

Y

600

ROFF

0

SKIP 809

17

( 1024)

MODE

2300

PIX

7766361

POS

4096

 

18

( 1088)

MODE

2000

PIX

5956761

POS

17151502

19

( 1152)

MODE

1600

PIX

3845618

POS

37076767

20

( 1216)

MODE

1200

PIX

2190418

POS

52798207

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Image 40
Contents Mar research Mar345 Program Manual Version February 24 All Rights ReservedContents Computer Requirements IntroductionEnvironment Command Line Running mar345Input Files Output FilesBasic Concepts and Rules Mar.logMar.spy Mar.lpStarting Up Main Window User InterfaceMenu Bar Menu Bar Windows SubmenuScanner Status Area Scanner Command Area Editing Data Collection Parameters Scan mode Collect modeItemDescription Title DirectoryItemDescription First image no No. of imagesExp. time OscillationsWavelength variable Loading and Saving Data Collection Parameters Moving Distance and Phi Starting Data Collection Stopping Data CollectionShutter Timer Single ScanGetting Help Hardware Status14 X−ray Setup Errors and Warnings Image Display Display WindowOptions Submenu FilesColors Show/Hide statisticsReset colors Do not/Keep color scalesTurn On/Off 3D−plot Next imageImage Area Mar345 Program Manual Work Area Information AreasLoad Buttons Zoom ButtonsWindow Title Colors WindowBlue scales RainbowMin MaxNo. of peaks Cross−Section WindowMessage area Moved using the right mouse button Vertical axisUpper horizontal axis Lower horizontal axisData Collection StrategiesChecking Parameters End of Data CollectionImageroot.SUMMARY Imageroot.htmlTroubleshooting No. DescriptionMessage ReasonTabel from previous 1101 Appendix Configuration File Calibration Files