I

PSD analysis (continued)

composite spectrum,

N

displaying 8-2,8-5

D

composite spectrum, how it is

E

generated 8-6

fragment labels, applying 8-8

X

optimum resolution observed near

 

Max Stitch Mass 8-4

 

peak detection algorithm 3-5

 

 

peak detection, checking 8-10

 

Peptide fragmentation macro C-9

 

precursor mass, changing 8-23

 

PSD, overview of creating 8-10

 

REF file, creating 8-21

 

segment labels, applying 8-8

 

segment traces, displaying 8-3

 

PSD calibration

 

equation 8-6

 

Precursor mass, impact of

 

changing 8-23

 

PSD data, in Voyager, displaying 1-13

 

PSD mode

 

constants 8-6

 

equation 8-6

R

Raw data, copying x,y pairs 1-39RCD file

deleting 2-39description 1-10exporting 2-39

extracting information from 1-36opening 2-39

RCT files

see also Results

name of raw data file result is derived from 2-38,2-39,2-41

opening 2-39,2-40saving 2-40

Read-only files, viewing 2-7

Realign, UV trace 4-30

Reapplying instrument calibration 5-22Recording a macro 6-37

REF files, see Calibration reference file (REF)

Reference masses, calibration

see also Calibration reference file (REF)

adding to REF file 5-18displaying list of 5-10,8-16for Voyager Sequence Control

Panel 5-27,5-28

selecting 5-10,5-14,7-17,8-15,8-16

References required for Data Explorer Toolbox (Visual Basic macros provided) C-3

Related documents xiv Removing traces

active 2-21inactive 2-21

Replace mode, setting for added traces 2-18

Resolution Calculator not displayed 9-8Resolution, mass

calculating 6-20

command not on menu 9-8default peak height used 6-20defaults used in peak

detection 3-24isotope B-4

isotope, Mariner data 3-53isotope, Voyager data 3-53isotope-limited B-5

PSD segment, optimum observed near Max Stitch Mass 8-4

results 6-22

trend within PSD segments 8-11Resolution-based peak detection, see

Peak detection, resolution-based

Index-22 Applied Biosystems